Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_13600Uncharacterized protein. (606 aa)    
Predicted Functional Partners:
TCAL_17082
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.989
TCAL_09912
Uncharacterized protein.
    
 
 0.940
TCAL_13038
Uncharacterized protein.
    
 
 0.939
TCAL_11909
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.799
TCAL_05901
Uncharacterized protein.
    
 
 0.780
TCAL_09132
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
 0.697
TCAL_05862
Uncharacterized protein.
    
 0.667
TCAL_00208
A4_EXTRA domain-containing protein.
   
 0.648
TCAL_08701
Uncharacterized protein.
     
 0.622
TCAL_03391
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.611
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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