STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_10956Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
TCAL_01404
eIF-5a domain-containing protein.
   
 0.958
TCAL_05912
Eukaryotic translation initiation factor 5A.
   
 0.958
TCAL_02210
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
   
 0.942
TCAL_04523
Uncharacterized protein.
 
      0.758
TCAL_03955
TP6A_N domain-containing protein.
     
 0.707
P5CS
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.707
TCAL_10217
Uncharacterized protein.
    
 
 0.671
TCAL_01865
Brix domain-containing protein.
 
 
    0.629
TCAL_01562
B30.2/SPRY domain-containing protein.
 
      0.628
TCAL_10813
Uncharacterized protein.
   
  
 0.623
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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