Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TCAL_01844 | TCAL_02405 | A0A553NFT0 | A0A553NY24 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | Uncharacterized protein. | 0.992 |
TCAL_01844 | TCAL_03954 | A0A553NFT0 | A0A553P2X1 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | Uncharacterized protein. | 0.999 |
TCAL_01844 | TCAL_05597 | A0A553NFT0 | A0A553NEP5 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | Uncharacterized protein. | 0.997 |
TCAL_01844 | TCAL_06351 | A0A553NFT0 | A0A553PAA4 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | Ribosomal_S27 domain-containing protein. | 0.832 |
TCAL_01844 | TCAL_06498 | A0A553NFT0 | A0A553PTN2 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | Uncharacterized protein. | 0.689 |
TCAL_01844 | TCAL_08114 | A0A553NFT0 | A0A553PJQ6 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.979 |
TCAL_01844 | TCAL_08227 | A0A553NFT0 | A0A553NFC0 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | SGF29 C-terminal domain-containing protein. | 0.991 |
TCAL_01844 | TCAL_09081 | A0A553NFT0 | A0A553NNR4 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | TAF domain-containing protein. | 0.999 |
TCAL_01844 | TCAL_09083 | A0A553NFT0 | A0A553NNP1 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | Ubiquitin carboxyl-terminal hydrolase. | 0.919 |
TCAL_01844 | TCAL_11360 | A0A553NFT0 | A0A553PHW5 | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | TFIID_20kDa domain-containing protein. | 0.999 |
TCAL_02405 | TCAL_01844 | A0A553NY24 | A0A553NFT0 | Uncharacterized protein. | Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. | 0.992 |
TCAL_02405 | TCAL_03954 | A0A553NY24 | A0A553P2X1 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
TCAL_02405 | TCAL_05597 | A0A553NY24 | A0A553NEP5 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
TCAL_02405 | TCAL_06351 | A0A553NY24 | A0A553PAA4 | Uncharacterized protein. | Ribosomal_S27 domain-containing protein. | 0.779 |
TCAL_02405 | TCAL_06498 | A0A553NY24 | A0A553PTN2 | Uncharacterized protein. | Uncharacterized protein. | 0.716 |
TCAL_02405 | TCAL_08114 | A0A553NY24 | A0A553PJQ6 | Uncharacterized protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.981 |
TCAL_02405 | TCAL_08227 | A0A553NY24 | A0A553NFC0 | Uncharacterized protein. | SGF29 C-terminal domain-containing protein. | 0.996 |
TCAL_02405 | TCAL_09081 | A0A553NY24 | A0A553NNR4 | Uncharacterized protein. | TAF domain-containing protein. | 0.996 |
TCAL_02405 | TCAL_09083 | A0A553NY24 | A0A553NNP1 | Uncharacterized protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.915 |
TCAL_02405 | TCAL_11360 | A0A553NY24 | A0A553PHW5 | Uncharacterized protein. | TFIID_20kDa domain-containing protein. | 0.987 |
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