STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_03322Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (328 aa)    
Predicted Functional Partners:
TCAL_00082
PlsC domain-containing protein.
      
 0.553
TCAL_03513
Uncharacterized protein.
      
 0.548
TCAL_04841
Uncharacterized protein.
   
  
 0.545
TCAL_01528
Uncharacterized protein.
      
 0.535
TCAL_02254
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.508
TCAL_04126
Deacetylase sirtuin-type domain-containing protein.
      
 0.440
TCAL_01875
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
0.424
TCAL_05984
Uncharacterized protein.
      
 0.414
TCAL_00918
Uncharacterized protein.
      
 0.407
TCAL_07834
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.404
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.