STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_03110Uncharacterized protein. (547 aa)    
Predicted Functional Partners:
TCAL_12908
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.952
TCAL_05523
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.944
TCAL_12870
Uncharacterized protein.
     
 0.933
TCAL_08666
Uncharacterized protein.
     
 0.933
TCAL_13566
Phospholipase A2.
   
 
 0.928
TCAL_01569
Uncharacterized protein.
   
 0.916
TCAL_03257
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 0.894
TCAL_10592
Phospholipase.
   
 0.857
TCAL_16724
FAD_binding_3 domain-containing protein.
     
 0.751
TCAL_06242
Uncharacterized protein.
     
 0.743
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.