TCAL_09653 protein (Tigriopus californicus) - STRING interaction network

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Score

TCAL_09653

ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (632 aa)

Predicted Functional Partners:

TCAL_08807

0.745

TCAL_14881

0.675

TCAL_11816

0.658

TCAL_04638

0.638

TCAL_03979

0.627

TCAL_00424

0.624

TCAL_09685

0.584

TCAL_11256

0.555

Fen1

0.548

TCAL_11508

0.544

Your Current Organism:

Tigriopus californicus

NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fen1	TCAL_00424	A0A553PAQ7	A0A553NC59	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	TPR_REGION domain-containing protein.	0.886
Fen1	TCAL_03979	A0A553PAQ7	A0A553ND28	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.999
Fen1	TCAL_09653	A0A553PAQ7	A0A553NSU0	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.548
Fen1	TCAL_11256	A0A553PAQ7	A0A553NE26	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	Ku domain-containing protein.	0.779
Fen1	TCAL_11816	A0A553PAQ7	A0A553N7V2	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	RECA_2 domain-containing protein.	0.861
TCAL_00424	Fen1	A0A553NC59	A0A553PAQ7	TPR_REGION domain-containing protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.886
TCAL_00424	TCAL_03979	A0A553NC59	A0A553ND28	TPR_REGION domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.998
TCAL_00424	TCAL_09653	A0A553NC59	A0A553NSU0	TPR_REGION domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.624
TCAL_00424	TCAL_11256	A0A553NC59	A0A553NE26	TPR_REGION domain-containing protein.	Ku domain-containing protein.	0.903
TCAL_00424	TCAL_11816	A0A553NC59	A0A553N7V2	TPR_REGION domain-containing protein.	RECA_2 domain-containing protein.	0.886
TCAL_03979	Fen1	A0A553ND28	A0A553PAQ7	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.999
TCAL_03979	TCAL_00424	A0A553ND28	A0A553NC59	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	TPR_REGION domain-containing protein.	0.998
TCAL_03979	TCAL_04638	A0A553ND28	A0A553ND35	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Uncharacterized protein.	0.572
TCAL_03979	TCAL_09653	A0A553ND28	A0A553NSU0	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.627
TCAL_03979	TCAL_11256	A0A553ND28	A0A553NE26	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	Ku domain-containing protein.	0.996
TCAL_03979	TCAL_11816	A0A553ND28	A0A553N7V2	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	RECA_2 domain-containing protein.	0.993
TCAL_04638	TCAL_03979	A0A553ND35	A0A553ND28	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.572
TCAL_04638	TCAL_09653	A0A553ND35	A0A553NSU0	Uncharacterized protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.638
TCAL_04638	TCAL_09685	A0A553ND35	A0A553NZ06	Uncharacterized protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.584
TCAL_04638	TCAL_14881	A0A553ND35	A0A553P1N3	Uncharacterized protein.	Uncharacterized protein.	0.429