STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_11013TIR domain-containing protein; Belongs to the Toll-like receptor family. (1054 aa)    
Predicted Functional Partners:
TCAL_03292
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
   0.823
TCAL_10350
Uncharacterized protein.
    
  0.780
TCAL_03922
Uncharacterized protein.
    
 0.722
TCAL_01863
Spaetzle domain-containing protein.
    
 0.708
TCAL_11909
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.690
TCAL_04032
TIR domain-containing protein.
    
 0.684
TCAL_06066
Uncharacterized protein.
    
 0.684
TCAL_13763
Spaetzle domain-containing protein.
    
 0.650
TCAL_03270
GOLD domain-containing protein.
    
 0.638
TCAL_05719
Uncharacterized protein.
    
 0.606
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.