STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_08903Uncharacterized protein. (3390 aa)    
Predicted Functional Partners:
TCAL_07355
Uncharacterized protein.
   
 0.974
TCAL_09370
Uncharacterized protein.
   
 0.974
TCAL_15585
Uncharacterized protein.
   
 0.933
TCAL_05714
Protein kinase domain-containing protein.
    
 0.866
TCAL_07115
Integrin beta; Belongs to the integrin beta chain family.
   
 0.826
TCAL_00709
Integrin beta.
   
 0.826
TCAL_12668
Integrin beta; Belongs to the integrin beta chain family.
   
 0.826
TCAL_10369
Uncharacterized protein.
   
 
 0.811
TCAL_02266
Uncharacterized protein.
    
 0.809
TCAL_06472
Uncharacterized protein.
    
 0.809
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.