STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_09626Uncharacterized protein. (699 aa)    
Predicted Functional Partners:
TCAL_11602
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.964
TCAL_15026
GMP_PDE_delta domain-containing protein.
    
 
 0.937
TCAL_00256
Uncharacterized protein.
   
 
 0.779
TCAL_00595
Uncharacterized protein.
    
 
 0.753
TCAL_11439
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.699
TCAL_04980
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.699
TCAL_00114
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.699
TCAL_01502
CEP209_CC5 domain-containing protein.
    
 0.695
TCAL_02057
Uncharacterized protein.
    
 
 0.695
TCAL_01043
Importin N-terminal domain-containing protein.
    
 
 0.660
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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