STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_04094Uncharacterized protein. (384 aa)    
Predicted Functional Partners:
TCAL_10350
Uncharacterized protein.
   
 0.954
TCAL_07404
Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.941
TCAL_14834
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.929
TCAL_13547
WD_REPEATS_REGION domain-containing protein.
   
 0.928
TCAL_13566
Phospholipase A2.
     
 0.926
TCAL_09798
WD_REPEATS_REGION domain-containing protein.
   
 0.913
TCAL_03202
Uncharacterized protein.
   
  0.835
TCAL_02066
WD_REPEATS_REGION domain-containing protein.
   
 0.829
TCAL_05846
Uncharacterized protein.
    
 0.778
TCAL_12547
Uncharacterized protein.
    
 0.774
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.