STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_05088FIP-RBD domain-containing protein. (457 aa)    
Predicted Functional Partners:
TCAL_09620
Uncharacterized protein.
    
 0.986
TCAL_11748
Uncharacterized protein.
    
 0.906
TCAL_08473
Sec2p domain-containing protein.
    
 0.829
TCAL_07124
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
   0.813
TCAL_00768
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.753
TCAL_03130
Uncharacterized protein.
    
 0.750
TCAL_00431
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.707
TCAL_00413
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
     
 0.689
TCAL_09743
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
     
 0.654
TCAL_00416
ANK_REP_REGION domain-containing protein.
     
 0.624
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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