STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_16409Protein kinase domain-containing protein. (664 aa)    
Predicted Functional Partners:
TCAL_08796
Uncharacterized protein.
   
0.928
TCAL_04020
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.916
TCAL_04240
TYR_PHOSPHATASE_2 domain-containing protein.
    
 
 0.915
TCAL_03836
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.902
TCAL_06852
Rhodanese domain-containing protein.
   
 0.898
TCAL_08852
Uncharacterized protein.
   
 
 0.891
TCAL_11408
Uncharacterized protein.
  
 
0.883
TCAL_11454
Protein kinase domain-containing protein.
  
0.875
TCAL_05078
Uncharacterized protein.
    
   0.860
TCAL_04187
Serine/threonine-protein kinase PLK.
  
0.858
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.