STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_08916Uncharacterized protein. (1076 aa)    
Predicted Functional Partners:
TCAL_08043
Deacetylase sirtuin-type domain-containing protein.
    
 0.977
TCAL_10698
Uncharacterized protein.
    
 0.812
TCAL_09234
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.729
TCAL_04519
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.729
TCAL_06498
Uncharacterized protein.
    
 0.651
TCAL_01332
Uncharacterized protein.
      
 0.645
TCAL_09235
Uncharacterized protein.
    
 
 0.608
TCAL_09669
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 0.599
TCAL_13480
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 0.599
TCAL_01226
Uncharacterized protein.
    
 0.599
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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