STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_03151Uncharacterized protein. (1066 aa)    
Predicted Functional Partners:
TCAL_07301
NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.
     
 0.950
TCAL_11146
Uncharacterized protein.
    
 0.936
TCAL_10814
Deacetylase sirtuin-type domain-containing protein.
    
  0.934
TCAL_05189
NAD-dependent protein deacetylase; Belongs to the sirtuin family. Class I subfamily.
    
  0.934
TCAL_10699
Deacetylase sirtuin-type domain-containing protein.
    
  0.934
TCAL_12375
Deacetylase sirtuin-type domain-containing protein.
    
  0.934
TCAL_05981
Uncharacterized protein.
    
 0.923
TCAL_00465
NAD-dependent protein deacylase; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
    
  0.902
TCAL_12968
Aspartate aminotransferase.
 
 
  0.834
TCAL_00729
Nicotinamide-nucleotide adenylyltransferase.
     
 0.831
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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