STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_03424Hydrolase_4 domain-containing protein. (333 aa)    
Predicted Functional Partners:
TCAL_04131
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.907
TCAL_03116
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 
 0.882
TCAL_12405
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
 
 0.877
TCAL_00157
Uncharacterized protein.
   
 
 0.867
TCAL_00849
Uncharacterized protein.
   
   0.862
TCAL_08370
Uncharacterized protein.
   
   0.851
TCAL_06478
Uncharacterized protein; Belongs to the complex I 49 kDa subunit family.
   
 
 0.832
TCAL_01585
Uncharacterized protein.
   
 
 0.829
TCAL_01480
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 
 0.809
TCAL_10348
Uncharacterized protein.
  
   0.803
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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