STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_10384Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
TCAL_03284
BRO1 domain-containing protein.
    
 
 0.898
TCAL_09321
WD_REPEATS_REGION domain-containing protein.
    
 
 0.849
TCAL_16348
Uncharacterized protein.
    
 
 0.802
TCAL_01172
G domain-containing protein.
     
 0.769
TCAL_04299
Uncharacterized protein.
    
 
 0.700
TCAL_07100
Uncharacterized protein.
   
 
 0.690
TCAL_04179
Uncharacterized protein; Belongs to the peptidase C2 family.
   
0.683
TCAL_05759
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 0.683
TCAL_02779
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.683
TCAL_10003
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 0.683
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.