STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_06717Protein kinase domain-containing protein. (231 aa)    
Predicted Functional Partners:
TCAL_03413
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
   
 0.998
TCAL_10361
Peptidase_M22 domain-containing protein.
  
 0.997
TCAL_10846
Uncharacterized protein.
 
      0.873
TCAL_01788
P53 domain-containing protein.
    
 0.859
TCAL_09367
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.684
TCAL_07971
P53 domain-containing protein.
    
 0.666
TCAL_02868
P53 domain-containing protein.
    
 0.666
TCAL_04872
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.617
TCAL_01766
Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.
 
 
    0.582
TCAL_03694
RIO domain-containing protein.
     
 0.574
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.