STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_00962Cytochrome b5 heme-binding domain-containing protein. (429 aa)    
Predicted Functional Partners:
TCAL_11030
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 
 0.682
TCAL_02134
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 
 0.667
TCAL_14769
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 
 0.667
TCAL_16660
Uncharacterized protein.
     
 0.654
TCAL_17268
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
  
 0.623
TCAL_09759
2Fe-2S ferredoxin-type domain-containing protein.
  
 
 0.621
TCAL_12694
2Fe-2S ferredoxin-type domain-containing protein.
  
 
 0.621
TCAL_03530
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.614
TCAL_00517
Uncharacterized protein.
     
 0.612
TCAL_05048
FAD_binding_3 domain-containing protein.
   
 
 0.575
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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