STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_02224Uncharacterized protein. (233 aa)    
Predicted Functional Partners:
TCAL_05886
Uncharacterized protein.
   
 0.972
TCAL_10990
Uncharacterized protein.
   
 
 0.931
TCAL_00938
BH4_AAA_HYDROXYL_2 domain-containing protein.
    
 0.872
TCAL_01528
Uncharacterized protein.
    
 0.868
TCAL_01888
Uncharacterized protein.
    
 0.837
TCAL_07610
Uncharacterized protein.
  
 0.702
TCAL_06408
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.667
TCAL_00345
MaoC-like domain-containing protein.
  
 0.666
TCAL_17074
Aldo_ket_red domain-containing protein.
  
 0.658
TCAL_00233
Uncharacterized protein.
    
 0.650
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.