STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_01303SH3 domain-containing protein. (463 aa)    
Predicted Functional Partners:
TCAL_08595
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 
 0.901
TCAL_17030
CAP_N domain-containing protein.
   
 
 0.901
TCAL_15526
Protein kinase domain-containing protein.
    
 
 0.833
TCAL_10445
Uncharacterized protein.
   
 
 0.812
TCAL_07747
Uncharacterized protein.
   
 
 0.806
TCAL_06782
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.795
TCAL_03976
Uncharacterized protein; Belongs to the actin family.
   
 
 0.782
TCAL_03233
Uncharacterized protein.
   
 
 0.773
TCAL_03941
Uncharacterized protein.
    
   0.773
TCAL_02955
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.716
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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