STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_10085Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
TCAL_11909
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.763
TCAL_06313
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.690
TCAL_06066
Uncharacterized protein.
    
 0.680
TCAL_06654
BTB domain-containing protein; Belongs to the potassium channel family.
    
 0.635
TCAL_00925
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
 0.611
TCAL_04405
Uncharacterized protein.
    
 0.581
TCAL_03075
Uncharacterized protein.
   
 0.572
TCAL_08249
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.570
TCAL_08452
Protein kinase domain-containing protein.
    
  0.570
TCAL_13050
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.570
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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