STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_00694Uncharacterized protein. (1866 aa)    
Predicted Functional Partners:
TCAL_03584
WD_REPEATS_REGION domain-containing protein.
    
 0.999
TCAL_08135
Uncharacterized protein.
    
 0.999
TCAL_17141
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 0.991
TCAL_02827
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.933
TCAL_02828
NUC194 domain-containing protein.
   
 0.933
TCAL_10863
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.932
TCAL_04524
WD_REPEATS_REGION domain-containing protein.
    
 0.849
TCAL_00360
Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.
    
 0.842
TCAL_00882
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
 0.804
TCAL_14316
Uncharacterized protein.
    
 0.804
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.