STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_06344Uncharacterized protein. (354 aa)    
Predicted Functional Partners:
TCAL_13566
Phospholipase A2.
    
  0.806
TCAL_13547
WD_REPEATS_REGION domain-containing protein.
   
 0.773
TCAL_09798
WD_REPEATS_REGION domain-containing protein.
   
 0.773
TCAL_03292
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.760
TCAL_02824
TPR_REGION domain-containing protein.
   
 0.748
TCAL_09110
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
 0.740
TCAL_05690
RGS domain-containing protein.
   
 0.737
TCAL_03470
Uncharacterized protein.
   
 0.736
TCAL_06024
Ubiquitin carboxyl-terminal hydrolase.
    
 0.728
TCAL_05916
RGS domain-containing protein.
   
 0.728
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.