STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_16794Acetyltransf_13 domain-containing protein. (523 aa)    
Predicted Functional Partners:
TCAL_13397
Uncharacterized protein.
    
 0.971
TCAL_08852
Uncharacterized protein.
   
 0.961
TCAL_01861
Structural maintenance of chromosomes protein.
   
 0.931
TCAL_09749
SMC_N domain-containing protein.
   
 0.931
TCAL_09748
Uncharacterized protein.
   
 0.931
TCAL_03745
Structural maintenance of chromosomes protein.
   
 0.920
TCAL_04891
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.904
TCAL_00674
Structural maintenance of chromosomes protein.
   
 0.899
TCAL_09424
SMC hinge domain-containing protein.
   
 0.839
TCAL_14541
Uncharacterized protein.
   
 0.839
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.