STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_02667Uncharacterized protein. (1228 aa)    
Predicted Functional Partners:
TCAL_08098
Glucosylceramidase.
  
 0.754
TCAL_12124
Uncharacterized protein.
  
 
 0.717
TCAL_06086
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.714
TCAL_11161
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.683
TCAL_09130
Sulfatase domain-containing protein.
   
 0.674
TCAL_06548
Uncharacterized protein; Belongs to the peptidase S10 family.
   
 0.644
TCAL_08616
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.633
TCAL_09405
PfkB domain-containing protein.
    
 0.622
TCAL_16369
Uncharacterized protein; Belongs to the carbohydrate kinase PfkB family.
    
 0.622
TCAL_13872
PfkB domain-containing protein.
    
 0.622
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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