STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_14741DNA_pol_B_exo1 domain-containing protein. (585 aa)    
Predicted Functional Partners:
TCAL_01790
Uncharacterized protein.
   
 0.989
TCAL_05588
Uncharacterized protein.
   
 0.972
TCAL_07715
HORMA domain-containing protein.
    
 0.971
TCAL_06254
Uncharacterized protein.
   
 0.969
TCAL_17385
DNA polymerase.
 
  
0.959
TCAL_01943
Uncharacterized protein.
    
 0.950
TCAL_16616
DNA polymerase.
 
  
  0.947
TCAL_10989
UmuC domain-containing protein.
   
 0.928
TCAL_04891
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.898
TCAL_09146
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
 0.881
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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