STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_13117Uncharacterized protein. (2239 aa)    
Predicted Functional Partners:
TCAL_00737
CUE domain-containing protein.
    
 0.986
TCAL_10812
J domain-containing protein.
     
 0.970
TCAL_00581
TPR_REGION domain-containing protein.
   
 0.969
TCAL_05511
Uncharacterized protein.
    
 
 0.961
TCAL_10031
MPN domain-containing protein.
   
 0.947
TCAL_09302
MPN domain-containing protein.
   
 0.947
TCAL_05587
Small nuclear ribonucleoprotein Sm D2.
   
 0.935
TCAL_15253
Small nuclear ribonucleoprotein Sm D3.
   
 0.933
TCAL_13791
Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.932
TCAL_04645
Sm domain-containing protein.
    
 0.924
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.