STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_12766DNA_MISMATCH_REPAIR_2 domain-containing protein. (1054 aa)    
Predicted Functional Partners:
TCAL_04891
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.998
TCAL_10900
DNA_mis_repair domain-containing protein.
 
 0.996
TCAL_00792
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
0.993
TCAL_03216
Uncharacterized protein.
 
 0.993
TCAL_12583
MUTSd domain-containing protein.
  
 0.989
TCAL_12582
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.986
TCAL_00424
TPR_REGION domain-containing protein.
   
 0.974
TCAL_01790
Uncharacterized protein.
   
 
 0.964
TCAL_07778
DNA_mis_repair domain-containing protein.
 
 0.958
TCAL_11996
Uncharacterized protein.
 
 0.945
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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