STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_12822Acetyl-coenzyme A synthetase. (676 aa)    
Predicted Functional Partners:
TCAL_05997
Citrate synthase; Belongs to the citrate synthase family.
  
 0.974
TCAL_00155
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.956
TCAL_02765
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.948
TCAL_08594
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.947
TCAL_11399
PX domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.947
TCAL_01055
Uncharacterized protein.
  
 
 0.945
TCAL_08619
C2H2-type domain-containing protein.
  
 
 0.944
TCAL_02920
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.941
TCAL_04840
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.940
TCAL_11733
Uncharacterized protein.
  
 0.928
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.