STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_10053C5-epim_C domain-containing protein. (594 aa)    
Predicted Functional Partners:
TCAL_07047
Uncharacterized protein.
   
 0.977
TCAL_04511
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
    
 
 0.736
TCAL_02678
Uncharacterized protein.
   
 
 0.694
TCAL_03162
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.604
TCAL_04203
Sulfotransfer_1 domain-containing protein.
      
 0.596
TCAL_00448
Uncharacterized protein.
      
 0.541
TCAL_12588
Uncharacterized protein.
      
 0.536
TCAL_05367
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.467
TCAL_05359
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.467
TCAL_13630
Uncharacterized protein; Belongs to the glycosyltransferase 47 family.
      
 0.400
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.