STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_11676Uncharacterized protein. (1138 aa)    
Predicted Functional Partners:
TCAL_06601
Uncharacterized protein.
     
 0.543
P5CS
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.531
TCAL_06066
Uncharacterized protein.
   
 0.478
TCAL_16370
Uncharacterized protein.
   
 
 0.471
TCAL_09855
PH domain-containing protein.
   
 
 0.471
TCAL_13305
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 
  0.461
TCAL_10267
Uncharacterized protein.
   
 
 0.446
TCAL_06953
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.439
TCAL_11732
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.439
TCAL_09392
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.408
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.