STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_17450bZIP_Maf domain-containing protein. (218 aa)    
Predicted Functional Partners:
TCAL_02505
BZIP domain-containing protein.
    
 0.621
TCAL_12068
BZIP domain-containing protein.
    
 0.621
TCAL_10218
BZIP domain-containing protein.
    
 0.621
TCAL_00089
bZIP_Maf domain-containing protein.
    
 0.621
TCAL_12898
BZIP domain-containing protein.
    
 0.464
TCAL_14378
BZIP domain-containing protein.
    
 0.464
TCAL_16565
BZIP domain-containing protein.
    
 
 0.429
TCAL_11019
BZIP domain-containing protein.
    
 
 0.429
TCAL_11616
BZIP domain-containing protein.
    
 
 0.429
TCAL_00820
RING-type domain-containing protein.
   
 
  0.412
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.