STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAL_13811Uncharacterized protein. (503 aa)    
Predicted Functional Partners:
TCAL_11380
Uncharacterized protein.
     
 0.834
TCAL_05729
Cytochrome b5 heme-binding domain-containing protein.
     
 0.830
TCAL_02038
Bis(5'-adenosyl)-triphosphatase.
     
 0.789
TCAL_13566
Phospholipase A2.
    
 0.747
TCAL_07610
Uncharacterized protein.
    
 0.691
TCAL_04131
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.667
TCAL_07992
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 0.649
TCAL_16410
FHA domain-containing protein.
    
 0.628
TCAL_02003
Uncharacterized protein.
    
 0.617
TCAL_03979
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.606
Your Current Organism:
Tigriopus californicus
NCBI taxonomy Id: 6832
Other names: T. californicus, tidepool copepod
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.