STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL45816.1Glycerophosphoryl diester phosphodiesterase. (260 aa)    
Predicted Functional Partners:
SCL45813.1
Rhodanese-related sulfurtransferase.
  
    0.877
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.833
SCL64234.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.808
SCL45817.1
PAS/PAC sensor signal transduction histidine kinase.
     
 0.676
SCL60331.1
Alkaline phosphatase D.
  
 
 0.636
SCL57047.1
Hypothetical protein.
     
 0.608
SCL45819.1
Histidine kinase-like ATPase domain-containing protein.
       0.606
SCL45812.1
Transcriptional attenuator, LytR family.
       0.585
SCL46101.1
Glycerol uptake facilitator (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.583
SCL48608.1
Glycerol uptake facilitator (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.583
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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