STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL45964.1Uncharacterized membrane protein. (503 aa)    
Predicted Functional Partners:
SCL64102.1
Protein of unknown function.
  
     0.593
SCL51015.1
Cobalamin-independent synthase, Catalytic domain.
  
     0.589
SCL60043.1
Protein of unknown function.
 
     0.559
SCL51673.1
Hypothetical protein.
  
     0.553
SCL60059.1
Alpha-1,6-mannosyltransferase.
  
     0.551
SCL50517.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
  
     0.541
SCL47349.1
Helicase/secretion neighborhood CpaE-like protein.
  
     0.536
SCL60324.1
Protein of unknown function.
  
     0.535
SCL64979.1
Putative hydrolase/uncharacterized protein, coenzyme F420 biosynthesis associated.
  
     0.516
SCL50521.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
  
     0.510
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.