STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46014.1Putative peptidoglycan lipid II flippase. (580 aa)    
Predicted Functional Partners:
SCL46331.1
FHA domain-containing protein.
  
 
 
 0.971
SCL56301.1
FHA domain-containing protein.
  
 
   0.709
SCL46341.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family.
 
  
 0.680
SCL46335.1
FHA domain-containing protein.
  
 
   0.624
SCL46010.1
poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.619
SCL62012.1
FHA domain-containing protein; Manually curated.
  
 
   0.611
SCL59572.1
Peptidoglycan synthetase FtsI.
  
   
 0.603
SCL46128.1
Hypothetical protein.
    
   0.544
SCL62346.1
Hypothetical protein.
    
   0.528
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
   
 0.455
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.