Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCL46070.1 | SCL46073.1 | GA0070617_0136 | GA0070617_0137 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 6-phosphogluconate dehydrogenase. | 0.710 |
| SCL46070.1 | SCL46079.1 | GA0070617_0136 | GA0070617_0139 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Protein of unknown function. | 0.821 |
| SCL46070.1 | SCL56291.1 | GA0070617_0136 | GA0070617_3197 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | MerR HTH family regulatory protein. | 0.494 |
| SCL46070.1 | SCL61329.1 | GA0070617_0136 | GA0070617_4631 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase III, delta subunit. | 0.996 |
| SCL46070.1 | recF | GA0070617_0136 | GA0070617_0138 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.972 |
| SCL46073.1 | SCL46070.1 | GA0070617_0137 | GA0070617_0136 | 6-phosphogluconate dehydrogenase. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.710 |
| SCL46073.1 | SCL46079.1 | GA0070617_0137 | GA0070617_0139 | 6-phosphogluconate dehydrogenase. | Protein of unknown function. | 0.917 |
| SCL46073.1 | recF | GA0070617_0137 | GA0070617_0138 | 6-phosphogluconate dehydrogenase. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.901 |
| SCL46079.1 | SCL46070.1 | GA0070617_0139 | GA0070617_0136 | Protein of unknown function. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.821 |
| SCL46079.1 | SCL46073.1 | GA0070617_0139 | GA0070617_0137 | Protein of unknown function. | 6-phosphogluconate dehydrogenase. | 0.917 |
| SCL46079.1 | SCL46971.1 | GA0070617_0139 | GA0070617_0442 | Protein of unknown function. | Broad specificity phosphatase PhoE. | 0.678 |
| SCL46079.1 | SCL49188.1 | GA0070617_0139 | GA0070617_1107 | Protein of unknown function. | C-terminal four TMM region of protein-O-mannosyltransferase. | 0.669 |
| SCL46079.1 | SCL56291.1 | GA0070617_0139 | GA0070617_3197 | Protein of unknown function. | MerR HTH family regulatory protein. | 0.660 |
| SCL46079.1 | SCL60019.1 | GA0070617_0139 | GA0070617_4263 | Protein of unknown function. | Protein of unknown function. | 0.656 |
| SCL46079.1 | SCL60451.1 | GA0070617_0139 | GA0070617_4383 | Protein of unknown function. | Protein of unknown function. | 0.651 |
| SCL46079.1 | SCL61329.1 | GA0070617_0139 | GA0070617_4631 | Protein of unknown function. | DNA polymerase III, delta subunit. | 0.796 |
| SCL46079.1 | rbpA | GA0070617_0139 | GA0070617_3160 | Protein of unknown function. | RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.674 |
| SCL46079.1 | recF | GA0070617_0139 | GA0070617_0138 | Protein of unknown function. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.926 |
| SCL46971.1 | SCL46079.1 | GA0070617_0442 | GA0070617_0139 | Broad specificity phosphatase PhoE. | Protein of unknown function. | 0.678 |
| SCL46971.1 | SCL49188.1 | GA0070617_0442 | GA0070617_1107 | Broad specificity phosphatase PhoE. | C-terminal four TMM region of protein-O-mannosyltransferase. | 0.502 |
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