STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46188.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (206 aa)    
Predicted Functional Partners:
SCL46951.1
Signal transduction histidine kinase.
  
 0.885
SCL50831.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.812
SCL58024.1
Signal transduction histidine kinase.
  
  0.805
SCL52388.1
GAF domain-containing protein.
 
 0.797
SCL46199.1
Signal transduction histidine kinase.
  
  0.794
SCL61740.1
Hypothetical protein.
  
   0.791
SCL65737.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  0.777
SCL56899.1
Signal transduction histidine kinase.
  
  0.775
SCL47960.1
Signal transduction histidine kinase.
  
  0.768
SCL64011.1
Signal transduction histidine kinase.
  
  0.760
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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