STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46199.1Signal transduction histidine kinase. (539 aa)    
Predicted Functional Partners:
SCL46203.1
Two component transcriptional regulator, LuxR family.
 
  0.919
SCL65709.1
Two component transcriptional regulator, LuxR family.
  
  0.858
SCL57346.1
Two component transcriptional regulator, LuxR family.
  
  0.853
SCL47957.1
Two component transcriptional regulator, LuxR family.
  
  0.852
SCL57343.1
Two-component system, NarL family, response regulator DesR.
  
  0.851
SCL46115.1
Two component transcriptional regulator, LuxR family.
  
  0.850
SCL65730.1
Two component transcriptional regulator, LuxR family.
  
  0.849
SCL60384.1
Two component transcriptional regulator, LuxR family.
  
  0.848
SCL52562.1
Two component transcriptional regulator, LuxR family.
  
  0.847
SCL53609.1
Two component transcriptional regulator, LuxR family.
  
  0.846
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.