STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46226.1CBS domain-containing protein. (141 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
  
 0.814
SCL52390.1
Nitroreductase.
   
  
 0.790
SCL59368.1
Glutamate synthase (NADH) large subunit.
    
 0.757
SCL55177.1
1-phosphofructokinase.
   
 
  0.752
SCL52380.1
Nitroreductase family protein.
   
  
 0.711
SCL48984.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.700
SCL50542.1
Dephospho-CoA kinase.
    
 0.700
SCL56892.1
Zn-dependent protease (includes SpoIVFB); Belongs to the peptidase M50B family.
  
    0.695
SCL49499.1
IMP dehydrogenase.
    
 0.658
SCL46230.1
RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.562
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.