STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46343.1Cell elongation-specific peptidoglycan D,D-transpeptidase. (501 aa)    
Predicted Functional Partners:
SCL46341.1
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Belongs to the SEDS family.
 
 0.999
SCL59559.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
 
 0.974
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 0.969
SCL46349.1
Serine/threonine protein kinase.
    
 0.950
SCL46335.1
FHA domain-containing protein.
 
   
 0.934
SCL46331.1
FHA domain-containing protein.
 
   
 0.924
SCL59572.1
Peptidoglycan synthetase FtsI.
  
  
0.921
SCL45973.1
Membrane carboxypeptidase (penicillin-binding protein).
 
 
 0.916
SCL46347.1
Serine/threonine protein kinase.
     
 0.893
SCL61604.1
Membrane carboxypeptidase (penicillin-binding protein).
 
 
 0.885
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.