STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46425.1Hemolysin III. (217 aa)    
Predicted Functional Partners:
SCL46600.1
Hypothetical protein.
    
  0.682
SCL50234.1
Hypothetical protein.
    
  0.682
SCL57121.1
Hypothetical protein.
    
  0.682
SCL60499.1
Hypothetical protein.
    
  0.682
SCL60505.1
Hypothetical protein.
    
  0.682
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.670
SCL46436.1
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.587
SCL46433.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
       0.574
SCL46429.1
Sensor histidine kinase inhibitor, KipI family.
       0.560
SCL50319.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.501
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (20%) [HD]