STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46433.1Biotin-dependent carboxylase uncharacterized domain-containing protein. (289 aa)    
Predicted Functional Partners:
SCL46429.1
Sensor histidine kinase inhibitor, KipI family.
 0.999
SCL46436.1
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
SCL46262.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
 
  0.934
SCL49509.1
Biotin carboxyl carrier protein /biotin carboxylase.
 
 
  0.934
SCL52809.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
 
 
  0.934
SCL56598.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
 
  0.934
SCL65040.1
propionyl-CoA carboxylase alpha chain.
 
 
  0.934
SCL59368.1
Glutamate synthase (NADH) large subunit.
   
 
  0.897
SCL49869.1
Amidase.
   
 0.777
SCL52731.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family.
   
 0.733
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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