STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL46701.1Protein of unknown function. (71 aa)    
Predicted Functional Partners:
SCL60451.1
Protein of unknown function.
  
     0.693
SCL59538.1
YggT family protein.
  
     0.555
SCL46971.1
Broad specificity phosphatase PhoE.
  
     0.545
SCL46704.1
Valine dehydrogenase (NAD+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.520
SCL46689.1
Hypothetical protein; Manually curated.
 
     0.484
SCL49188.1
C-terminal four TMM region of protein-O-mannosyltransferase.
  
     0.433
SCL46708.1
Hypothetical protein.
       0.430
SCL56291.1
MerR HTH family regulatory protein.
  
     0.416
SCL52070.1
Protein of unknown function.
  
     0.406
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.