STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL47036.1Terpene synthase family, metal binding domain. (317 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.789
SCL59368.1
Glutamate synthase (NADH) large subunit.
    
 0.757
SCL48984.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.700
SCL50542.1
Dephospho-CoA kinase.
    
 0.700
SCL54794.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.669
SCL47255.1
Heptaprenyl diphosphate synthase; Manually curated; Belongs to the FPP/GGPP synthase family.
     
 0.667
SCL49499.1
IMP dehydrogenase.
    
 0.658
SCL57979.1
Esterase, PHB depolymerase family.
  
     0.638
SCL48008.1
Esterase, PHB depolymerase family.
  
     0.626
SCL46377.1
Pregnancy-associated plasma protein-A.
  
    0.612
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: medium (50%) [HD]