STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL47630.1Protein of unknown function. (357 aa)    
Predicted Functional Partners:
SCL58577.1
Fibronectin type III domain-containing protein.
  
  0.780
SCL60019.1
Protein of unknown function.
  
   
 0.754
SCL46091.1
Transmembrane protein of unknown function.
  
     0.753
SCL47733.1
Hypothetical protein.
  
     0.749
SCL60463.1
Hypothetical protein.
  
     0.731
SCL63667.1
Hypothetical protein.
  
     0.722
SCL51785.1
Hypothetical protein.
  
     0.720
SCL64930.1
Hypothetical protein.
  
     0.706
SCL63780.1
Hypothetical protein.
  
     0.705
SCL49385.1
Hypothetical protein.
  
  
  0.703
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (38%) [HD]