STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL47682.1Manually curated. (252 aa)    
Predicted Functional Partners:
SCL47686.1
Alpha,alpha-trehalose phosphorylase.
 
 0.997
SCL46834.1
Alpha,alpha-trehalose phosphorylase.
 
 0.990
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.701
SCL53904.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
  0.636
SCL61588.1
Trehalose 6-phosphatase.
   
 0.608
SCL47590.1
Phosphoglycolate phosphatase.
  
 
  0.594
SCL50542.1
Dephospho-CoA kinase.
    
  0.594
SCL47679.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
     
 0.535
SCL47676.1
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
       0.428
SCL47667.1
ABC-2 type transport system permease protein.
       0.405
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.