STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL47741.1DNA-binding transcriptional regulator, FrmR family. (99 aa)    
Predicted Functional Partners:
SCL47745.1
Copper ion binding protein.
  
  
 0.809
SCL47751.1
Cu+-exporting ATPase.
 
  
 0.775
SCL57692.1
S-formylglutathione hydrolase FrmB.
  
  
 0.775
SCL57253.1
S-(hydroxymethyl)mycothiol dehydrogenase.
  
  
 0.773
SCL58155.1
Alcohol dehydrogenase.
  
  
 0.773
SCL48012.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
    
   0.573
SCL53348.1
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Belongs to the sigma-70 factor family.
    
   0.573
SCL57094.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
    
   0.573
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.541
SCL47748.1
Hypothetical protein.
       0.538
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.