STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL47796.1Cysteine synthase A. (366 aa)    
Predicted Functional Partners:
SCL47790.1
Predicted arabinose efflux permease, MFS family.
 
  
 0.991
SCL51285.1
Cystathionine gamma-lyase.
 
 0.903
SCL49866.1
Cystathionine gamma-lyase.
 
 0.891
SCL59293.1
Cystathionine gamma-synthase.
 
 0.873
SCL47805.1
Argininosuccinate lyase.
  0.870
SCL47799.1
Putative heavy-metal chelation.
 
     0.865
SCL53099.1
Transferase hexapeptide (six repeat-containing protein).
  
 0.864
SCL49655.1
Multicopper oxidase.
  
  
 0.848
SCL47793.1
L-alanine-DL-glutamate epimerase.
 
     0.831
SCL62482.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.811
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
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