STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL47929.1Carbohydrate ABC transporter membrane protein 2, CUT1 family. (293 aa)    
Predicted Functional Partners:
SCL47927.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.996
SCL47933.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.985
SCL56198.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.979
SCL56195.1
Putative aldouronate transport system substrate-binding protein.
 
  0.953
SCL55097.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.920
SCL57889.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 0.910
SCL58756.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.897
SCL58728.1
Raffinose/stachyose/melibiose transport system permease protein.
  0.890
SCL51079.1
Cellobiose transport system permease protein.
 
 0.885
SCL54913.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
  0.885
Your Current Organism:
Micromonospora yangpuensis
NCBI taxonomy Id: 683228
Other names: CGMCC 4.5736, DSM 45577, M. yangpuensis, Micromonospora sp. FXJ6.011, Micromonospora yangpuensis Zhang et al. 2012, NBRC 107727, strain FXJ6.011
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.